Skip to main content
BioTool

Imaging, statistics & figures

12 resources · Process biological images, analyze data and create research figures.

Fiji

Process microscopy images using image analysis plugins.
Image analysis
Desktop software

QuPath

Analyze digital pathology and tissue images.
Image analysis
Desktop software

CellProfiler

Process and quantify cell images in batches.
Image analysis
Desktop software

napari

View and interactively analyze multidimensional biological images.
Image analysis
Desktop software / Python

GraphPad Prism

Perform biomedical statistics and create data plots.
Statistics & figures
Desktop software

BioRender

Draw research mechanism diagrams and experimental illustrations.
Statistics & figures
Online tool

微生信

Analyze bioinformatics data and create plots online.
Statistics & figures
Online toolkit

ilastik

Interactively classify images, segment objects and count targets.
Image segmentation
Desktop software

Cytoscape

Visualize biological interaction networks and integrate associated data.
Network visualization
Desktop software

R

Perform statistical analysis, data processing and reproducible research.
Statistical computing
Statistical programming environment

ggplot2

Create statistical graphics using a grammar of graphics.
Statistical graphics
Software package

jamovi

Perform common statistical analyses through a graphical interface.
Graphical statistics
Desktop software